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COVID-19 Bioinformatics: Introduction
Background Knowledge
Overview
Gene Expression Omnibus
Getting Data
Analyzing Data
Interpreting Results
Further Analysis
Next Steps
Bonus: mRNA Vaccines
GEO Documentation
Free Udemy Gene Expression Course (also by me)
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Next Steps
Where to go from here
  1. 1.
    Instead of comparing COVID-19 to controls, what about comparing severe COVID-19 to mild COVID-19? You could find genes that are linked to worse side effects. This could help doctors with assigning treatments. The dataset we used in this course has data for severe and mild COVID-19, if you remember.
  2. 2.
    Find your own dataset! Gene Expression Omnibus has thousands of public gene expression datasets. You can find your own on virtually any disease you want, from Alzheimer's to pancreatic cancer to diabetes.
  3. 3.
    Check out these papers I wrote for examples/inspiration. (bottom of page)
  4. 4.
    Certificate: To get your certificate, complete this feedback form: https://forms.gle/NBv6Gi7pbQqreLGu7​
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Identification of Blood-based Biomarkers for Early Stage Parkinson’s Disease
medRxiv
Integrative Bioinformatics Analysis Identifies Noninvasive miRNA Biomarkers for Lung Cancer
medRxiv

Remember, teens can do research too!

Gene Expression Omnibus - Previous
Further Analysis
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Bonus: mRNA Vaccines
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Remember, teens can do research too!